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Periodicity of hydrophobic amino acids in peptide
Periodicity of hydrophobic amino acids in peptide





The propensities of the amino acids calculated from a large non-redundant database of proteins are found to be highly position-specific and vary continuously throughout the length of the β-strand.

periodicity of hydrophobic amino acids in peptide

However, a comprehensive analysis of the sequence dependent amino acid propensities at positions between the ends of the β-strand has not been investigated.

periodicity of hydrophobic amino acids in peptide

Recent studies have shown that most of the amino acids have significantly high or low propensity towards both ends of β-strands. Despite the importance of β-strands as main building blocks in proteins, the propensity of amino acid in β-strands is not well-understood as it has been more difficult to determine experimentally compared to α-helices.







Periodicity of hydrophobic amino acids in peptide